Publications by Mapmygenome Team

<ol style="list-style-type: decimal;margin-left:26px;"> <li><span style="color:#222222;">[HTML]&nbsp;</span><a href="https://www.frontiersin.org/articles/10.3389/fgene.2020.00753/full"><span style="color:#1155CC;">A Review on the Challenges in Indian Genomics Research for Variant Identification and Interpretation</span></a><span style="color:;;">&nbsp;SK Pemmasani, R Raman,&nbsp;</span><a href="https://scholar.google.com/citations?user=cEb2X_MAAAAJ&amp;hl=en&amp;oi=sra"><span style="color:#1155CC;">R Mohapatra</span></a><span style="color:#222222;">… - Frontiers in …, 2020 - frontiersin.org Today, genomic data holds great potential to improve healthcare strategies across various dimensions - be it disease prevention, enhanced diagnosis or optimized treatment. The</span></li> <li><a href="https://jamanetwork.com/journals/jama/article-abstract/2776292"><span style="color:#222222;text-decoration:none;">&nbsp;</span></a><a href="https://jamanetwork.com/journals/jama/article-abstract/2776292"><span style="color:#1155CC;">Prevalence of SARS-CoV-2 in Karnataka, India</span></a> <a href="https://scholar.google.com/citations?user=Mqcj5kEAAAAJ&amp;hl=en&amp;oi=sra"><span style="color:#1155CC;">M Mohanan</span></a><span style="color:#222222;">,</span><a href="https://scholar.google.com/citations?user=E90f2WAAAAAJ&amp;hl=en&amp;oi=sra"><span style="color:#222222;text-decoration:none;">&nbsp;</span></a><a href="https://scholar.google.com/citations?user=E90f2WAAAAAJ&amp;hl=en&amp;oi=sra"><span style="color:#1155CC;">A Malani</span></a><span style="color:#222222;">,</span><a href="https://scholar.google.com/citations?user=ihNk0nAAAAAJ&amp;hl=en&amp;oi=sra"><span style="color:#222222;text-decoration:none;">&nbsp;</span></a><a href="https://scholar.google.com/citations?user=ihNk0nAAAAAJ&amp;hl=en&amp;oi=sra"><span style="color:#1155CC;">K Krishnan</span></a><span style="color:#222222;">,</span><a href="https://scholar.google.com/citations?user=imB4KT0AAAAJ&amp;hl=en&amp;oi=sra"><span style="color:#222222;text-decoration:none;">&nbsp;</span></a><a href="https://scholar.google.com/citations?user=imB4KT0AAAAJ&amp;hl=en&amp;oi=sra"><span style="color:#1155CC;">A Acharya</span></a><span style="color:#222222;">&nbsp;- Jama, 2021 - jamanetwork.com Methods| This study was approved by the Indian government and institutional review boards at participating institutions. Written informed consent was obtained from all participants (…</span></li> <li><span style="color:#222222;">[HTML]&nbsp;</span><a href="https://journals.plos.org/plosone/article?id=10.1371/journal.pone.0115635"><span style="color:#1155CC;">WIP1 phosphatase as a potential therapeutic target in neuroblastoma</span></a><span style="color:#222222;">…,&nbsp;</span><a href="https://scholar.google.com/citations?user=Hqq7_pUAAAAJ&amp;hl=en&amp;oi=sra"><span style="color:#1155CC;">T Dayaram</span></a><span style="color:#222222;">, AG Gilmartin, G Ganji,&nbsp;</span><a href="https://scholar.google.com/citations?user=ZSGwNmMAAAAJ&amp;hl=en&amp;oi=sra"><span style="color:#1155CC;">SK Pemmasani</span></a><span style="color:#222222;">… - PloS one, 2015 - journals.plos.org. &nbsp;The wild-type p53-induced phosphatase 1 (WIP1) is a serine/threonine phosphatase that negatively regulates multiple proteins involved in DNA damage response including p53, CHK</span></li> <li><span style="color:#222222;">Prevalence rates of ADIPOQ polymorphisms in Indian population and a comparison with other populations Year : 2018 | Volume : 22 | Issue : 1 | Page : 36-40&nbsp;</span><a href="http://www.ijem.in/searchresult.asp?search=&amp;author=Sandhya+Kiran+Pemmasani&amp;journal=Y&amp;but_search=Search&amp;entries=10&amp;pg=1&amp;s=0"><span style="color:#1155CC;">Sandhya Kiran Pemmasani</span></a><span style="color:;;">1,</span><a href="http://www.ijem.in/searchresult.asp?search=&amp;author=Rasika+Raman&amp;journal=Y&amp;but_search=Search&amp;entries=10&amp;pg=1&amp;s=0"><span style="color:#222222;text-decoration:none;">&nbsp;</span></a><a href="http://www.ijem.in/searchresult.asp?search=&amp;author=Rasika+Raman&amp;journal=Y&amp;but_search=Search&amp;entries=10&amp;pg=1&amp;s=0"><span style="color:#1155CC;">Rasika Raman</span></a><span style="color:#222222;">2,</span><a href="http://www.ijem.in/searchresult.asp?search=&amp;author=Anuradha+Acharya&amp;journal=Y&amp;but_search=Search&amp;entries=10&amp;pg=1&amp;s=0"><span style="color:#222222;text-decoration:none;">&nbsp;</span></a><a href="http://www.ijem.in/searchresult.asp?search=&amp;author=Anuradha+Acharya&amp;journal=Y&amp;but_search=Search&amp;entries=10&amp;pg=1&amp;s=0"><span style="color:#1155CC;">Anuradha Acharya</span></a><span style="color:#222222;">31 Genetics Department, Mapmygenome India Limited; Bioinformatics Department, Ocimum Biosolutions Limited, Hyderabad, Telangana, India2 Genetics Department, Mapmygenome India Limited, Hyderabad, Telangana, India3 Bioinformatics Department, Ocimum Biosolutions Limited, Hyderabad, Telangana, India</span></li> <li><span style="color:#222222;">Comprehensive analysis of WGS and RNA-seq data to identify genetic variations in a patient with clear cell renal carcinoma SK Pemmasani, N Chitturi,&nbsp;</span><a href="https://scholar.google.com/citations?user=imB4KT0AAAAJ&amp;hl=en&amp;oi=sra"><span style="color:#1155CC;">A Acharya</span></a><span style="color:#222222;">&nbsp;- Molecular Genetics and Metabolism, 2021 - Elsevier</span></li> <li><span style="color:#222222;">[HTML]&nbsp;</span><a href="https://www.frontiersin.org/articles/10.3389/fgene.2020.00861/full"><span style="color:#1155CC;">Infectivity and progression of COVID-19 based on selected host candidate gene variants</span></a><span style="color:#222222;">&nbsp;GR Iyer, S Samajder, S Zubeda, V Mali, SK Pv… - Frontiers in …, 2020 - frontiersin.org Introduction: Severe Acute Respiratory Syndrome Corona Virus- 2 (SARS-CoV-2) has spread around the globe. Susceptibility has been associated with age, biological sex and other …</span></li> <li><span style="color:#222222;">EZH2 inhibition as a therapeutic strategy for lymphoma with EZH2-activating mutations.&nbsp;</span><span style="line-height:109%;color:#222222;">Nature</span><span style="color:#222222;">(2012)</span></li> <li><span style="color:#222222;">Genome-Wide Expression Analysis Suggests Perturbation of Vascular Homeostasis during High Altitude Pulmonary Edema</span></li> <li><span style="color:#222222;">Polymorphism in RD1 locus and its effect on downstream genes among South Indian clinical isolates of&nbsp;</span><span style="line-height:109%;color:#222222;font-size:14px;">M.Tuberculosis</span></li> <li><span style="color:#222222;">Comprehensive meta-analysis, co-expression, and miRNA nested network analysis identifies gene candidates in citrus against Huanglongbing disease. Nidhi Rawat,Sandhya P. Kiran,Dongliang Du,Fred G. GmitterJr andZhanao DengBMC Plant Biology201515:184&nbsp;</span></li> <li><span style="color:#222222;">Data Integration and Analysis: P.falciparum Microarray Data as a Case Study &nbsp;Rekha Rao Bioinformatics Scientist Ocimum Biosolutions Ltd. Ashwin Sivakumar Head-Research outreach Ocimum Biosolutions Ltd. Govind Rao Bioinformatics Product manager Ocimum Biosolutions Ltd. Hyderabad, (A.P.),</span></li> <li><span style="color:#222222;">Differentially expressed genes in tumors of prostate cancer in American patients with European and African origin K.Venkatesh, D.Lajwanti, Sandhya.P.Kiran, D.V.Raje, AnurajNayarisseri Journal of Pharmacy Research (2013).</span></li> <li><span style="color:#222222;">Identification of cis-regulatory elements associated with salinity and drought stress tolerance in rice from co-expressed gene interaction networks Pragya Mishra,Nisha Singh, Ajay Jain, Neha Jain, Vagish Mishra, Pushplatha G, Kiran P. Sandhya, Nagendra Kumar Singh and Vandna Rai Bioinformation. 2018; 14(3): 123–131doi: 10.6026/97320630014123</span></li> <li><a href="https://books.google.co.in/books?hl=en&amp;lr=&amp;id=o2e2CgAAQBAJ&amp;oi=fnd&amp;pg=PA247&amp;dq=mapmygenome&amp;ots=cBvrLuzNah&amp;sig=OHZm9gQc_sDQYnjDpf-1KPCFW6w"><span style="color:#1155CC;">Impact of Human Exome Sequencing on Clinical Research</span></a><span style="color:#222222;">&nbsp;A Acharya, S Kannan,</span><a href="https://scholar.google.co.in/citations?user=yC-UZtoAAAAJ&amp;hl=en&amp;oi=sra"><span style="color:#222222;text-decoration:none;">&nbsp;</span></a><a href="https://scholar.google.co.in/citations?user=yC-UZtoAAAAJ&amp;hl=en&amp;oi=sra"><span style="color:#1155CC;">B Kumar</span></a><span style="color:#222222;">… - … Ethics and Training: …, 2017 - books.google.com 247 Chapter 12 Impact of Human Exome Sequencing on Clinical Research Anu Acharya Mapmygenome India, India Shibichakravarthy Kannan Ocimum Biosolutions, India Brajendra Kumar Ocimum Biosolutions, India Jasmine Khurana Mapmygenome India, India Sushma</span></li> <li><span style="color:#222222;">[BOOK]</span><a href="https://books.google.co.in/books?hl=en&amp;lr=&amp;id=PlqHAwAAQBAJ&amp;oi=fnd&amp;pg=PR2&amp;dq=%22Anu+Acharya%22&amp;ots=6Zcgvd8eiy&amp;sig=NI71b7XKjH4HOcMzt8ns5YNmux4"><span style="color:#222222;text-decoration:none;">&nbsp;</span></a><a href="https://books.google.co.in/books?hl=en&amp;lr=&amp;id=PlqHAwAAQBAJ&amp;oi=fnd&amp;pg=PR2&amp;dq=%22Anu+Acharya%22&amp;ots=6Zcgvd8eiy&amp;sig=NI71b7XKjH4HOcMzt8ns5YNmux4"><span style="color:#1155CC;">Pharmaceutical Outsourcing: Discovery and Preclinical Services</span></a><span style="color:#222222;">&nbsp;WC Stevens Jr, M Lim-Wilby - 2011 - books.google.com ... Page 9. Contract Research Organizations 9. Turning Cells Into Reagents 167 Oliver Klotzsche – CCS Cell Culture Service 10. Research as a Service (Raas) – Creating a New Trend 182 Anu Acharya – Ocimum Biosolutions 11.</span></li> <li><a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8970592/"><span style="color:#1155CC;">Establishment and Characterization of Brain Cancer Primary Cell Cultures From Patients to Enable Phenotypic Screening for New Drugs</span></a><span style="color:#222222;">&nbsp;M dePadua, P Kulothungan, R Lath… - Frontiers in …, 2022 - ncbi.nlm.nih.govAim: Desmoplastic infantile ganglioglioma (DIG), is a rare tumor arising mainly during the first 2 years of life. Molecular characterization of these benign yet rapidly proliferating tumors</span></li> <li><a href="https://annalsofrscb.ro/index.php/journal/article/view/10450"><span style="color:#1155CC;">Current Perspective Of Pharmacogenomics In Clinical Practice In India</span></a><span style="color:#222222;">&nbsp;SR Nittu, K Ruchika, SM Ch, D Divya… - Annals of the …, 2021 - annalsofrscb.ro Pharmacogenomics is a new field of study that investigates how genetic characteristics influence a person‘s drug response. Pharmacogenetics investigates" monogenetic variants" that&nbsp;</span></li> <li><a href="https://papers.ssrn.com/sol3/papers.cfm?abstract_id=3894709"><span style="color:#1155CC;">Prevalence of COVID-19 in rural versus urban areas in a low-income country: findings from a State-Wide study in Karnataka, India</span></a><a href="https://scholar.google.com/citations?user=Mqcj5kEAAAAJ&amp;hl=en&amp;oi=sra"><span style="color:#222222;text-decoration:none;">&nbsp;</span></a><a href="https://scholar.google.com/citations?user=Mqcj5kEAAAAJ&amp;hl=en&amp;oi=sra"><span style="color:#1155CC;">M Mohanan</span></a><span style="color:#222222;">,</span><a href="https://scholar.google.com/citations?user=E90f2WAAAAAJ&amp;hl=en&amp;oi=sra"><span style="color:#222222;text-decoration:none;">&nbsp;</span></a><a href="https://scholar.google.com/citations?user=E90f2WAAAAAJ&amp;hl=en&amp;oi=sra"><span style="color:#1155CC;">A Malani</span></a><span style="color:#222222;">,</span><a href="https://scholar.google.com/citations?user=ihNk0nAAAAAJ&amp;hl=en&amp;oi=sra"><span style="color:#222222;text-decoration:none;">&nbsp;</span></a><a href="https://scholar.google.com/citations?user=ihNk0nAAAAAJ&amp;hl=en&amp;oi=sra"><span style="color:#1155CC;">K Krishnan</span></a><span style="color:#222222;">… - University of Chicago …, 2021 - papers.ssrn.com… The VTM we used was the CovisafeTM kit (manufactured by Mapmygenome) for collecting oropharyngeal swabs that make it possible to transport the swabs at ambient temperature</span></li> <li><a href="https://www.medrxiv.org/content/10.1101/2021.12.15.21267816.abstract"><span style="color:#1155CC;">COVID-19 and Indian population: a comparative genetic analysis</span></a> <a href="https://scholar.google.com/citations?user=rDYqBh0AAAAJ&amp;hl=en&amp;oi=sra"><span style="color:#1155CC;">S Patil</span></a><span style="color:#222222;">, SK Pemmasani, N Chitturi, I Bhatnagar… - medRxiv, 2021 - medrxiv.org Genotype data of these polymorphisms were either sourced from the GenomegaDB database of Mapmygenome India Ltd. (sample size = 3054; Indian origin) or were imputed.</span></li> <li><a href="https://www.nature.com/articles/s41430-020-0560-4"><span style="color:#1155CC;">The influence of polymorphisms of fat mass and obesity (FTO, rs9939609) and vitamin D receptor (VDR, BsmI, TaqI, ApaI, FokI) genes on weight loss by diet and …</span></a><span style="color:#222222;">&nbsp;S Gulati, A Misra, R Tiwari, M Sharma… - European Journal of …, 2020 - nature.com Objective The aim of the present study was to evaluate polymorphisms of fat mass and obesity (FTO; rs9939609) and vitamin D receptor (VDR, FokI (rs2228570), BsmI (rs1544410), …</span></li> <li><span style="color:#222222;">[PDF]&nbsp;</span><a href="https://www.academia.edu/download/67492333/PAPER9IRJNASNOV2016.pdf"><span style="color:#1155CC;">PREVALENCE OF KRAS CODON 12 MUTATION IN PATIENTS WITH ORAL SQUAMOUS CELL CARCINOMA (OSCC) FROM SOUTH INDIAN POPULATION</span></a><span style="color:#222222;">&nbsp;S Gadde, S Poda, S Veeravalli, L Addala - academia.edu Background: The RAS gene family is the most studied and best characterized of the known cancer-related genes KRAS is the most frequently altered gene, with mutations occurring in</span></li> <li><a href="https://www.linkedin.com/redir/general-malware-page?url=https%3A%2F%2Fwww%2epeertechzpublications%2ecom%2Farticles%2FJHCSR-6-128%2ephp"><span style="line-height:109%;color:#1155CC;font-size:14px;">Detection of katG Ser315Thr substitution in Mycobacterium tuberculosis infected patients using PCR -RFLP method for screening Isoniazid-Resistance</span></a><span style="color:#222222;">&nbsp;SK Jadhav, SR Mote - Journal of HIV for Clinical and …, 2019 - peertechzpublications.comMaterials and Methods A total of ten Sputum samples which are TB Confirmed positive samples were collected from primary health care centers Hyderabad. The patients are already …</span></li> <li><a href="http://216.10.240.19/v4-i12/99%20jmscr.pdf"><span style="color:#1155CC;">Lack of the BRAF V600E Mutation in Oral Squamous Cell Carcinoma</span></a><span style="color:#222222;">&nbsp;S Gadde, S Poda, S Veeravilli, L Addala - 216.10.240.19 The aim of this study was to estimate the frequency of BRAF (V600E) mutation in oral squamous cell carcinoma (OSCC) in the south Indian population. In the present study we analyzed&nbsp;</span><br>&nbsp;&nbsp;</li> </ol>

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